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# Data Set Module Chronic Diseases (V3.3) 2.16.840.1.113883.3.1937.777.64.1.4

Name | Id
--- | ---
Module Chronic Diseases (V3.3) (v3.3) | 2.16.840.1.113883.3.1937.777.64.1.4
Version / effective date | Expiration date
2023‑11‑30 |
Description
NFDI4Health LogicalModel Epidemiology of Chronic Diseases Metadata Schema (Use Case 5.2) V3.3
Relationship |
Version | Module Chronic Diseases (nfdhtfcov19-dataset-4 - 2023‑09‑11 19:06:50)
Name | Details [‑] |
--- | --- | ---
ChronicDiseasesEpidemiology nfdhtfcov19-dataelement-117 | link
Id | nfdhtfcov19-dataelement-117 (2023‑11‑30) v3.3
Description | Chronic disease data collected in the [RESOURCE]
### Properties
ChronicDiseasesEpidemiology | ChronicDiseasesEpidemiology
Relationship | Specialization ChronicDiseasesEpidemiology (nfdhtfcov19-dataelement-117 - 2023‑09‑29 10:19:04)
Rationale | Description: Group of items providing information on chronic disease data collection.
Source | NFDI4Health UC 5.2 requirements
Comment | Cardinality: 1..*, if Resource.chronicDiseases == 'Yes' AND Resource.classification.type == ('Study protocol' OR 'Informed consent form' OR 'Patient information sheet' OR 'Manual of operations (SOPs)' OR 'Statistical analysis plan' OR 'Data management plan' OR 'Case report form' OR 'Interview scheme and themes' OR 'Observation guide' OR 'Discussion guide' OR 'Participant tasks' OR 'Other study document' OR 'Other'); otherwise 0.. 0
Comment | Cardinality: 1..*, if Resource.chronicDiseases == 'True' AND Resource.classification.type == ('C93381' OR 'C16468' OR 'C15518' OR 'C115779' OR 'C115761' OR 'C115756' OR 'C40988' OR '016' OR '017' OR '018' OR '019' OR '021' OR 'C17649'); otherwise 0.. 0
Used by | one transaction, 0 templates, inherited 0 times
| This concept is used in transaction NFDI4Health Resource (v3.3) (0 … * Conditional) in scenario ChronicDiseases3.3 (v3.3)
commonChronicDiseaseName nfdhtfcov19-dataelement-102 |
Id | nfdhtfcov19-dataelement-102 (2023‑11‑30) v3.3
Description | On which of the following common chronic diseases were data collected?
### Properties
ChronicDiseasesEpidemiology.commonChronicDiseaseName | ChronicDiseasesEpidemiology.commonChronicDiseaseName
Relationship | Specialization commonChronicDiseaseName (nfdhtfcov19-dataelement-102 - 2023‑09‑11 19:06:50)
Rationale | Description: Common chronic diseases on which data were collected in the study.
Source | NFDI4Health UC 5.2 requirements ICD-10 [https://icd.who.int/browse10/2019/en] Zentrum für Krebsregisterdaten [ https://www.krebsdaten.de/] Statistisches Bundesamt [ https://www.destatis.de/]
Comment | Additional information: The values originate from the following sources: 1) 10 types of cancer with the highest incidence in Germany, by gender, based on 2017/2018 German cancer registry data (RKI, Zentrum für Krebsregisterdaten, https://www.krebsdaten.de/); 2) 10 cardiovascular diseases with highest mortality in Germany in 2020 (www.destatis.de). All values follow the classifiction system ICD-10 (WHO's International Statistical Classification of Diseases and Related Health Problems, 10th Revision (ICD-10), https://icd.who.int/en).
Comment | Cardinality: 1..1
Operationalization | Short input help: Select one value from the list.
Value Domain | Code
Choice list |
Concept List
Concept | Description | Assigned references
Malignant neoplasms (C00-C97) |  | code "363346000" (Malignant neoplasms) from code system "SNOMED Clinical Terms"
Type 2 Diabetes mellitus (E11-E14) |  | code "44054006" (Diabetes mellitus type 2) from code system "SNOMED Clinical Terms"
Hyperlipidaemia (E78) |  | code "55822004" (Hyperlipidemia) from code system "SNOMED Clinical Terms"
Hypertensive diseases (I10-I15) |  | code "38341003" (Hypertensive disorder) from code system "SNOMED Clinical Terms"
Ischaemic heart diseases (I20-I25) |  | code "414545008" (Ischemic heart disease) from code system "SNOMED Clinical Terms"
Heart valve diseases (I34-I39) |  | code "368009" (Heart valve disorder) from code system "SNOMED Clinical Terms"
Cardiac arrhythmia (I47-I49) |  | code "698247007" (Cardiac arrhythmia) from code system "SNOMED Clinical Terms"
Heart failure (I50) |  | code "84114007" (Heart failure) from code system "SNOMED Clinical Terms"
Cerebrovascular diseases (I60-I69) |  | code "62914000" (Cerebrovascular disease) from code system "SNOMED Clinical Terms"
Diseases of the circulatory system falling into multiple categories |  | code "49601007" (Disorder of cardiovascular system) from code system "SNOMED Clinical Terms"
Data not collected for any of the above-listed diseases |  | code "201" (Data not collected for any of the above-listed diseases) from code system "NFDI4Health_CS_MDS_Remaining_Concepts3.3"
Value Set NFDI4Health_VS_MDS_CD_CommonChronicDiseaseName_SCT_Local (version 2024‑03‑01 13:01:35)
Used by | one transaction, 0 templates, inherited 0 times
| This concept is used in transaction NFDI4Health Resource (v3.3) (1 … 1 Mandatory) in scenario ChronicDiseases3.3 (v3.3)
dataCollected nfdhtfcov19-dataelement-118 |
Id | nfdhtfcov19-dataelement-118 (2023‑11‑30) v3.3
Description | Type of data collected
### Properties
ChronicDiseasesEpidemiology.dataCollected | ChronicDiseasesEpidemiology.dataCollected
Relationship | Specialization dataCollected (nfdhtfcov19-dataelement-118 - 2023‑09‑29 10:28:52)
Rationale | Description: Specification of the type of data collected.
Source | NFDI4Health UC 5.2 requirements
Comment | Cardinality: 1..1
Operationalization | Short input help: Select one value from the list.
Value Domain | Code
Choice list |
Concept List
Concept | Description | Assigned references
Prevalent | Persons in a population who have a particular disease or attribute at a specified point in time or over a specified period of time [CDC.gov (https://www.cdc.gov/csels/dsepd/ss1978/lesson3/section2.html)]. | code "C17010" (Prevalence) from code system "FDA RouteOfAdministration"
Incident | Occurrence of new cases of disease or injury in a population over a specified period of time [CDC.gov (https://www.cdc.gov/csels/dsepd/ss1978/lesson3/section2.html)]. | code "C16726" (Incidence) from code system "FDA RouteOfAdministration"
Value Set required NFDI4Health_VS_MDS_CD_DataCollected_NCI (version 2024‑01‑22 12:52:07)
Used by | one transaction, 0 templates, inherited 0 times
| This concept is used in transaction NFDI4Health Resource (v3.3) (1 … 1 Mandatory) in scenario ChronicDiseases3.3 (v3.3)
informationSources nfdhtfcov19-dataelement-119 |
Id | nfdhtfcov19-dataelement-119 (2023‑11‑30) v3.3
Description | From which source(s) are data generated/extracted?
### Properties
ChronicDiseasesEpidemiology.informationSources | ChronicDiseasesEpidemiology.informationSources
Relationship | Specialization informationSources (nfdhtfcov19-dataelement-119 - 2023‑09‑29 10:31:15)
Rationale | Description: Specification of the source(s) from which information is generated/extracted.
Source | NFDI4Health UC 5.2 requirements
Comment | Additional information: Treat prevalent and incident diseases separately (selected values should be specific for prevalent diseases and then separately incident diseases).
Comment | Cardinality: 1..*
Operationalization | Short input help: Select all that apply.
Value Domain | Code
Choice list |
Concept List
Concept | Description | Assigned references
Self-report (questionnaires or interviews), cases verified | A method of data collection which involves asking a participant, for example, through questionnaires or interviews. The collected information is then verified by asking the treating physician, through administrative databases (e.g., health insurance data), or clinical examinations [NFDI4Health]. | code "116" (Self-report (questionnaires or interviews), cases verified) from code system "NFDI4Health_CS_MDS_Remaining_Concepts"
Self-report (questionnaires or interviews), cases not verified | A method of data collection which involves asking a participant, for example, through questionnaires or interviews. The collected information is not verified by any external information or clinical examinations [NFDI4Health]. | code "117" (Self-report (questionnaires or interviews), cases not verified) from code system "NFDI4Health_CS_MDS_Remaining_Concepts"
Administrative databases | Information about administrative data [Maelstrom (doi: 10.1371/journal.pone.0200926)]. | code "C15426" (Database) from code system "FDA RouteOfAdministration"
Biosamples | A sample of material, such as urine, blood, tissue, cells, DNA, RNA, or protein, from the study subject [NCI Dictionary of Cancer Terms (https://www.cancer.gov/publications/dictionaries/cancer-terms)]. | code "C43412" (Biosample) from code system "FDA RouteOfAdministration"
Physical measures (e.g., clinical examination) | Information about physical functioning. Information in this domain is generally measured [Maelstrom (doi: 10.1371/journal.pone.0200926)]. | code "C20989" (Physical Examination) from code system "FDA RouteOfAdministration"
Other | Sources of data other than self-report, administrative databases, biosamples and physical measures [NFDI4Health]. | code "C17649" (Other) from code system "FDA RouteOfAdministration"
Value Set required NFDI4Health_VS_MDS_CD_Information_Sources_NCI_Local (version 2024‑01‑22 13:10:39)
Used by | one transaction, 0 templates, inherited 0 times
| This concept is used in transaction NFDI4Health Resource (v3.3) (1 … * Mandatory) in scenario ChronicDiseases3.3 (v3.3)
outcomesVerificationMethods nfdhtfcov19-dataelement-122 |
Id | nfdhtfcov19-dataelement-122 (2023‑11‑30 20:55:16) v3.3
Description | How were outcomes generally verified?
### Properties
ChronicDiseasesEpidemiology.outcomesVerificationMethods | ChronicDiseasesEpidemiology.outcomesVerificationMethods
Rationale | Description: Methods of verification differ by study. All the details per outcome are not needed here but rather an explanation of how outcomes were verified in general.
Source | NFDI4Health UC 5.2 requirements
Comment | Cardinality: 0..*
Value Domain | String
Used by | one transaction, 0 templates, inherited 0 times
| This concept is used in transaction NFDI4Health Resource (v3.3) (0 … *) in scenario ChronicDiseases3.3 (v3.3)